Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC1P07992 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC1P07992 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC1P07992 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC1P07992 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC1P07992 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
ERCC1P07992 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC1P07992 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ERCC1P07992 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
ERCC1P07992 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC1P07992 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC1P07992 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC1P07992 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC1P07992 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ERCC1P07992 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.57■□□□□ 0.24
ERCC1P07992 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.57■□□□□ 0.24
ERCC1P07992 RBM17P1-201ENST00000453646 1190 ntBASIC16.57■□□□□ 0.24
ERCC1P07992 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.57■□□□□ 0.24
ERCC1P07992 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC1P07992 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ERCC1P07992 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ERCC1P07992 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC1P07992 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ERCC1P07992 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC1P07992 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ERCC1P07992 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC1P07992 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC1P07992 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ERCC1P07992 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ERCC1P07992 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC1P07992 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC1P07992 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.56■□□□□ 0.24
ERCC1P07992 AC116562.2-201ENST00000507042 360 ntBASIC16.56■□□□□ 0.24
ERCC1P07992 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC1P07992 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
ERCC1P07992 DGCR10-201ENST00000609839 495 ntBASIC16.56■□□□□ 0.24
ERCC1P07992 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC1P07992 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC1P07992 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC1P07992 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ERCC1P07992 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC1P07992 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 AC090164.3-201ENST00000610780 2143 ntBASIC16.55■□□□□ 0.24
ERCC1P07992 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ERCC1P07992 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC1P07992 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.55■□□□□ 0.24
ERCC1P07992 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC1P07992 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ERCC1P07992 MIR1238-201ENST00000408483 83 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms