Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DQB2P05538 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 AC009113.1-201ENST00000570267 2443 ntBASIC18.93■□□□□ 0.62
HLA-DQB2P05538 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 KRT18P22-201ENST00000402024 1347 ntBASIC18.93■□□□□ 0.62
HLA-DQB2P05538 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DQB2P05538 AC034236.2-201ENST00000606662 1610 ntBASIC18.92■□□□□ 0.62
HLA-DQB2P05538 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 HMGA1P5-201ENST00000412453 271 ntBASIC18.92■□□□□ 0.62
HLA-DQB2P05538 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 KRT18P41-201ENST00000518924 1277 ntBASIC18.92■□□□□ 0.62
HLA-DQB2P05538 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DQB2P05538 AC112777.1-201ENST00000540175 1423 ntBASIC18.91■□□□□ 0.62
HLA-DQB2P05538 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 AC012306.2-201ENST00000609350 630 ntBASIC18.91■□□□□ 0.62
HLA-DQB2P05538 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DQB2P05538 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms