Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.71■□□□□ 0.11
CD74P04233 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CD74P04233 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD74P04233 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CD74P04233 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CD74P04233 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
CD74P04233 TNRC18P3-201ENST00000441896 2691 ntBASIC15.71■□□□□ 0.1
CD74P04233 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.7■□□□□ 0.1
CD74P04233 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.7■□□□□ 0.1
CD74P04233 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CD74P04233 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
CD74P04233 PCDHA12-202ENST00000613593 2588 ntBASIC15.7■□□□□ 0.1
CD74P04233 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CD74P04233 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.7■□□□□ 0.1
CD74P04233 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD74P04233 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CD74P04233 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.7■□□□□ 0.1
CD74P04233 ZNRF2P3-201ENST00000424200 374 ntBASIC15.7■□□□□ 0.1
CD74P04233 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.7■□□□□ 0.1
CD74P04233 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.7■□□□□ 0.1
CD74P04233 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.7■□□□□ 0.1
CD74P04233 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.7■□□□□ 0.1
CD74P04233 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CD74P04233 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CD74P04233 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.7■□□□□ 0.1
CD74P04233 AC124067.4-201ENST00000519691 2379 ntBASIC15.7■□□□□ 0.1
CD74P04233 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.7■□□□□ 0.1
CD74P04233 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD74P04233 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CD74P04233 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CD74P04233 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.69■□□□□ 0.1
CD74P04233 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.69■□□□□ 0.1
CD74P04233 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CD74P04233 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CD74P04233 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CD74P04233 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.69■□□□□ 0.1
CD74P04233 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.69■□□□□ 0.1
CD74P04233 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.69■□□□□ 0.1
CD74P04233 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.69■□□□□ 0.1
CD74P04233 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.69■□□□□ 0.1
CD74P04233 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.69■□□□□ 0.1
CD74P04233 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.69■□□□□ 0.1
CD74P04233 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD74P04233 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.68■□□□□ 0.1
CD74P04233 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
CD74P04233 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 AC108860.2-201ENST00000562760 2183 ntBASIC15.68■□□□□ 0.1
CD74P04233 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 AC141586.5-201ENST00000624546 2050 ntBASIC15.68■□□□□ 0.1
CD74P04233 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CD74P04233 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.68■□□□□ 0.1
CD74P04233 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
CD74P04233 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD74P04233 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.68■□□□□ 0.1
CD74P04233 AL121829.2-201ENST00000620908 328 ntBASIC15.68■□□□□ 0.1
CD74P04233 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms