Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.14■□□□□ 0.65
TOP3BO95985 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.14■□□□□ 0.65
TOP3BO95985 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.14■□□□□ 0.65
TOP3BO95985 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP3BO95985 HCG4P8-203ENST00000443049 980 ntBASIC19.14■□□□□ 0.65
TOP3BO95985 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP3BO95985 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.14■□□□□ 0.65
TOP3BO95985 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP3BO95985 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.14■□□□□ 0.65
TOP3BO95985 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
TOP3BO95985 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TOP3BO95985 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.14■□□□□ 0.65
TOP3BO95985 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
TOP3BO95985 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TOP3BO95985 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.14■□□□□ 0.65
TOP3BO95985 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.13■□□□□ 0.65
TOP3BO95985 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.13■□□□□ 0.65
TOP3BO95985 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TOP3BO95985 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.13■□□□□ 0.65
TOP3BO95985 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TOP3BO95985 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.13■□□□□ 0.65
TOP3BO95985 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.13■□□□□ 0.65
TOP3BO95985 YBX1P2-201ENST00000489612 999 ntBASIC19.13■□□□□ 0.65
TOP3BO95985 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TOP3BO95985 IER3-202ENST00000376377 1350 ntBASIC19.13■□□□□ 0.65
TOP3BO95985 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 AIRN-201ENST00000601203 4374 ntBASIC19.13■□□□□ 0.65
TOP3BO95985 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.13■□□□□ 0.65
TOP3BO95985 AL031598.1-201ENST00000561511 1773 ntBASIC19.13■□□□□ 0.65
TOP3BO95985 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 IRX1P1-201ENST00000438849 1838 ntBASIC19.13■□□□□ 0.65
TOP3BO95985 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
TOP3BO95985 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TOP3BO95985 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 AC005082.1-201ENST00000413042 2259 ntBASIC19.13■□□□□ 0.65
TOP3BO95985 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TOP3BO95985 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TOP3BO95985 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP3BO95985 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP3BO95985 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TOP3BO95985 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.12■□□□□ 0.65
TOP3BO95985 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP3BO95985 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.12■□□□□ 0.65
TOP3BO95985 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TOP3BO95985 TSPY5P-201ENST00000426936 936 ntBASIC19.12■□□□□ 0.65
TOP3BO95985 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TOP3BO95985 AP005242.2-201ENST00000580065 1175 ntBASIC19.12■□□□□ 0.65
TOP3BO95985 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.12■□□□□ 0.65
TOP3BO95985 AL031985.4-201ENST00000642138 673 ntBASIC19.12■□□□□ 0.65
TOP3BO95985 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP3BO95985 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP3BO95985 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TOP3BO95985 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TOP3BO95985 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TOP3BO95985 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TOP3BO95985 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.11■□□□□ 0.65
TOP3BO95985 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.11■□□□□ 0.65
TOP3BO95985 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.11■□□□□ 0.65
TOP3BO95985 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TOP3BO95985 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
TOP3BO95985 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TOP3BO95985 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.11■□□□□ 0.65
TOP3BO95985 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.11■□□□□ 0.65
TOP3BO95985 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.11■□□□□ 0.65
TOP3BO95985 AC128688.1-201ENST00000487626 519 ntBASIC19.11■□□□□ 0.65
TOP3BO95985 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.11■□□□□ 0.65
TOP3BO95985 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.11■□□□□ 0.65
TOP3BO95985 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.11■□□□□ 0.65
TOP3BO95985 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.11■□□□□ 0.65
TOP3BO95985 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.11■□□□□ 0.65
TOP3BO95985 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TOP3BO95985 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TOP3BO95985 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms