Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.24■□□□□ 0.35
NKX2-2O95096 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.24■□□□□ 0.35
NKX2-2O95096 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.24■□□□□ 0.35
NKX2-2O95096 AP000593.1-201ENST00000393668 712 ntBASIC17.24■□□□□ 0.35
NKX2-2O95096 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NKX2-2O95096 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.24■□□□□ 0.35
NKX2-2O95096 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NKX2-2O95096 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.24■□□□□ 0.35
NKX2-2O95096 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.24■□□□□ 0.35
NKX2-2O95096 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
NKX2-2O95096 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 MYLKP1-201ENST00000509077 1580 ntBASIC17.23■□□□□ 0.35
NKX2-2O95096 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NKX2-2O95096 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.23■□□□□ 0.35
NKX2-2O95096 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.23■□□□□ 0.35
NKX2-2O95096 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.23■□□□□ 0.35
NKX2-2O95096 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NKX2-2O95096 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.23■□□□□ 0.35
NKX2-2O95096 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
NKX2-2O95096 AC104581.1-202ENST00000635932 2618 ntBASIC17.23■□□□□ 0.35
NKX2-2O95096 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NKX2-2O95096 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NKX2-2O95096 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NKX2-2O95096 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.23■□□□□ 0.35
NKX2-2O95096 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 HOXB1-202ENST00000577092 1414 ntBASIC17.22■□□□□ 0.35
NKX2-2O95096 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NKX2-2O95096 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NKX2-2O95096 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.22■□□□□ 0.35
NKX2-2O95096 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.22■□□□□ 0.35
NKX2-2O95096 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.22■□□□□ 0.35
NKX2-2O95096 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.22■□□□□ 0.35
NKX2-2O95096 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
NKX2-2O95096 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
NKX2-2O95096 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NKX2-2O95096 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NKX2-2O95096 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NKX2-2O95096 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.21■□□□□ 0.35
NKX2-2O95096 KRT8P7-201ENST00000533003 1432 ntBASIC17.21■□□□□ 0.35
NKX2-2O95096 KRT8P50-201ENST00000562022 1438 ntBASIC17.21■□□□□ 0.35
NKX2-2O95096 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
NKX2-2O95096 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.21■□□□□ 0.35
NKX2-2O95096 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.21■□□□□ 0.35
NKX2-2O95096 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.21■□□□□ 0.35
NKX2-2O95096 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.21■□□□□ 0.35
NKX2-2O95096 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.21■□□□□ 0.35
NKX2-2O95096 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NKX2-2O95096 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms