Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SCN2BO60939 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.75■□□□□ 0.43
SCN2BO60939 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCN2BO60939 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.75■□□□□ 0.43
SCN2BO60939 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN2BO60939 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.75■□□□□ 0.43
SCN2BO60939 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN2BO60939 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.75■□□□□ 0.43
SCN2BO60939 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SCN2BO60939 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCN2BO60939 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN2BO60939 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN2BO60939 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN2BO60939 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN2BO60939 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN2BO60939 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN2BO60939 AC004951.3-201ENST00000418645 1148 ntBASIC17.74■□□□□ 0.43
SCN2BO60939 AC130371.2-201ENST00000619443 611 ntBASIC17.74■□□□□ 0.43
SCN2BO60939 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SCN2BO60939 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCN2BO60939 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.74■□□□□ 0.43
SCN2BO60939 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SCN2BO60939 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCN2BO60939 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SCN2BO60939 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.74■□□□□ 0.43
SCN2BO60939 ABALON-201ENST00000629058 1903 ntBASIC17.74■□□□□ 0.43
SCN2BO60939 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCN2BO60939 HTR7P1-202ENST00000624664 4411 ntBASIC17.73■□□□□ 0.43
SCN2BO60939 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SCN2BO60939 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SCN2BO60939 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SCN2BO60939 AL357033.4-201ENST00000617703 1807 ntBASIC17.73■□□□□ 0.43
SCN2BO60939 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SCN2BO60939 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.73■□□□□ 0.43
SCN2BO60939 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.73■□□□□ 0.43
SCN2BO60939 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SCN2BO60939 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.73■□□□□ 0.43
SCN2BO60939 AP002982.1-201ENST00000492365 877 ntBASIC17.73■□□□□ 0.43
SCN2BO60939 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SCN2BO60939 MIR4651-201ENST00000582622 73 ntBASIC17.73■□□□□ 0.43
SCN2BO60939 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 AL133373.2-201ENST00000623187 2828 ntBASIC17.73■□□□□ 0.43
SCN2BO60939 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SCN2BO60939 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.73■□□□□ 0.43
SCN2BO60939 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.73■□□□□ 0.43
SCN2BO60939 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCN2BO60939 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SCN2BO60939 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN2BO60939 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN2BO60939 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN2BO60939 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN2BO60939 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN2BO60939 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN2BO60939 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SCN2BO60939 AL162741.1-201ENST00000565563 1558 ntBASIC17.72■□□□□ 0.43
SCN2BO60939 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.72■□□□□ 0.43
SCN2BO60939 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.72■□□□□ 0.43
SCN2BO60939 CKBP1-201ENST00000565489 1086 ntBASIC17.72■□□□□ 0.43
SCN2BO60939 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 NOC2LP2-201ENST00000407594 1944 ntBASIC17.72■□□□□ 0.43
SCN2BO60939 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SCN2BO60939 AC018470.1-201ENST00000624790 3129 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms