Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.75■□□□□ 0.27
PFDN1O60925 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.75■□□□□ 0.27
PFDN1O60925 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.75■□□□□ 0.27
PFDN1O60925 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PFDN1O60925 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
PFDN1O60925 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.75■□□□□ 0.27
PFDN1O60925 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.75■□□□□ 0.27
PFDN1O60925 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.75■□□□□ 0.27
PFDN1O60925 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.75■□□□□ 0.27
PFDN1O60925 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.75■□□□□ 0.27
PFDN1O60925 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PFDN1O60925 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.75■□□□□ 0.27
PFDN1O60925 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PFDN1O60925 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PFDN1O60925 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PFDN1O60925 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PFDN1O60925 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.74■□□□□ 0.27
PFDN1O60925 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 ANO7L1-203ENST00000602586 1720 ntBASIC16.74■□□□□ 0.27
PFDN1O60925 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 ABHD17AP4-201ENST00000411545 909 ntBASIC16.74■□□□□ 0.27
PFDN1O60925 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.74■□□□□ 0.27
PFDN1O60925 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.74■□□□□ 0.27
PFDN1O60925 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 TEX21P-204ENST00000641479 1693 ntBASIC16.74■□□□□ 0.27
PFDN1O60925 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.74■□□□□ 0.27
PFDN1O60925 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PFDN1O60925 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.74■□□□□ 0.27
PFDN1O60925 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PFDN1O60925 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PFDN1O60925 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.73■□□□□ 0.27
PFDN1O60925 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.73■□□□□ 0.27
PFDN1O60925 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PFDN1O60925 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PFDN1O60925 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.73■□□□□ 0.27
PFDN1O60925 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.73■□□□□ 0.27
PFDN1O60925 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.73■□□□□ 0.27
PFDN1O60925 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PFDN1O60925 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.73■□□□□ 0.27
PFDN1O60925 MIR2861-201ENST00000636310 90 ntBASIC16.73■□□□□ 0.27
PFDN1O60925 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PFDN1O60925 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 NORAD-201ENST00000565493 5339 ntBASIC16.73■□□□□ 0.27
PFDN1O60925 AC105020.1-201ENST00000435356 2205 ntBASIC16.73■□□□□ 0.27
PFDN1O60925 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.73■□□□□ 0.27
PFDN1O60925 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.73■□□□□ 0.27
PFDN1O60925 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.73■□□□□ 0.27
PFDN1O60925 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PFDN1O60925 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN1O60925 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN1O60925 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN1O60925 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms