Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA12O60330 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA12O60330 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 BX276092.5-203ENST00000456199 560 ntBASIC18.5■□□□□ 0.55
PCDHGA12O60330 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA12O60330 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA12O60330 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 AC111152.3-201ENST00000569699 673 ntBASIC18.49■□□□□ 0.55
PCDHGA12O60330 RN7SL510P-201ENST00000581311 263 ntBASIC18.49■□□□□ 0.55
PCDHGA12O60330 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA12O60330 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA12O60330 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 AC016734.2-201ENST00000624325 1377 ntBASIC18.48■□□□□ 0.55
PCDHGA12O60330 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA12O60330 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGA12O60330 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms