Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.94■□□□□ 0.14
SSNA1O43805 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.94■□□□□ 0.14
SSNA1O43805 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SSNA1O43805 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.94■□□□□ 0.14
SSNA1O43805 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.94■□□□□ 0.14
SSNA1O43805 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.94■□□□□ 0.14
SSNA1O43805 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.94■□□□□ 0.14
SSNA1O43805 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SSNA1O43805 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.94■□□□□ 0.14
SSNA1O43805 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.94■□□□□ 0.14
SSNA1O43805 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SSNA1O43805 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SSNA1O43805 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
SSNA1O43805 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.94■□□□□ 0.14
SSNA1O43805 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 SDHAP1-207ENST00000440850 2000 ntBASIC15.94■□□□□ 0.14
SSNA1O43805 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSNA1O43805 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
SSNA1O43805 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SSNA1O43805 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
SSNA1O43805 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.93■□□□□ 0.14
SSNA1O43805 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 AC108860.2-201ENST00000562760 2183 ntBASIC15.93■□□□□ 0.14
SSNA1O43805 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SSNA1O43805 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.93■□□□□ 0.14
SSNA1O43805 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.93■□□□□ 0.14
SSNA1O43805 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.93■□□□□ 0.14
SSNA1O43805 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SSNA1O43805 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SSNA1O43805 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SSNA1O43805 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSNA1O43805 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SSNA1O43805 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.92■□□□□ 0.14
SSNA1O43805 AC011270.2-201ENST00000624293 2550 ntBASIC15.92■□□□□ 0.14
SSNA1O43805 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.92■□□□□ 0.14
SSNA1O43805 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
SSNA1O43805 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.92■□□□□ 0.14
SSNA1O43805 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.92■□□□□ 0.14
SSNA1O43805 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 FEM1AP3-201ENST00000403722 1741 ntBASIC15.92■□□□□ 0.14
SSNA1O43805 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.92■□□□□ 0.14
SSNA1O43805 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SSNA1O43805 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SSNA1O43805 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SSNA1O43805 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.92■□□□□ 0.14
SSNA1O43805 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.92■□□□□ 0.14
SSNA1O43805 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SSNA1O43805 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.92■□□□□ 0.14
SSNA1O43805 AC046158.3-201ENST00000624947 2558 ntBASIC15.92■□□□□ 0.14
SSNA1O43805 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SSNA1O43805 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.92■□□□□ 0.14
SSNA1O43805 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.92■□□□□ 0.14
SSNA1O43805 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.92■□□□□ 0.14
SSNA1O43805 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SSNA1O43805 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.92■□□□□ 0.14
SSNA1O43805 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms