Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AL109659.2-201ENST00000606809 1674 ntBASIC20.98■□□□□ 0.95
ACTN4O43707 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ACTN4O43707 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
ACTN4O43707 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.97■□□□□ 0.95
ACTN4O43707 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ACTN4O43707 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 ABHD17AP1-201ENST00000358206 933 ntBASIC20.97■□□□□ 0.95
ACTN4O43707 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.97■□□□□ 0.95
ACTN4O43707 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ACTN4O43707 AL158047.1-201ENST00000445918 881 ntBASIC20.97■□□□□ 0.95
ACTN4O43707 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.97■□□□□ 0.95
ACTN4O43707 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ACTN4O43707 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ACTN4O43707 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.97■□□□□ 0.95
ACTN4O43707 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ACTN4O43707 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.96■□□□□ 0.95
ACTN4O43707 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 AC112777.1-201ENST00000540175 1423 ntBASIC20.96■□□□□ 0.95
ACTN4O43707 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 ABALON-201ENST00000629058 1903 ntBASIC20.96■□□□□ 0.95
ACTN4O43707 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.96■□□□□ 0.95
ACTN4O43707 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.96■□□□□ 0.95
ACTN4O43707 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.96■□□□□ 0.95
ACTN4O43707 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.96■□□□□ 0.95
ACTN4O43707 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ACTN4O43707 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.96■□□□□ 0.95
ACTN4O43707 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.96■□□□□ 0.95
ACTN4O43707 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.96■□□□□ 0.95
ACTN4O43707 AC233702.5-201ENST00000584107 538 ntBASIC20.96■□□□□ 0.95
ACTN4O43707 DGCR10-201ENST00000609839 495 ntBASIC20.96■□□□□ 0.95
ACTN4O43707 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.96■□□□□ 0.95
ACTN4O43707 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.96■□□□□ 0.95
ACTN4O43707 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ACTN4O43707 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ACTN4O43707 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.96■□□□□ 0.95
ACTN4O43707 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ACTN4O43707 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ACTN4O43707 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ACTN4O43707 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
ACTN4O43707 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 AL162741.1-201ENST00000565563 1558 ntBASIC20.95■□□□□ 0.94
ACTN4O43707 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ACTN4O43707 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 AC012618.2-201ENST00000428058 849 ntBASIC20.95■□□□□ 0.94
ACTN4O43707 MFAP1P1-201ENST00000442257 1255 ntBASIC20.95■□□□□ 0.94
ACTN4O43707 UBE2SP1-201ENST00000450587 669 ntBASIC20.95■□□□□ 0.94
ACTN4O43707 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.95■□□□□ 0.94
ACTN4O43707 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.95■□□□□ 0.94
ACTN4O43707 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ACTN4O43707 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ACTN4O43707 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ACTN4O43707 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms