Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RNF13O43567 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 PRORSD1P-201ENST00000295112 541 ntBASIC17.03■□□□□ 0.32
RNF13O43567 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF13O43567 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF13O43567 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF13O43567 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF13O43567 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF13O43567 AC073195.1-201ENST00000607241 877 ntBASIC17.03■□□□□ 0.32
RNF13O43567 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF13O43567 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF13O43567 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF13O43567 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF13O43567 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF13O43567 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF13O43567 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF13O43567 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF13O43567 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF13O43567 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.02■□□□□ 0.32
RNF13O43567 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF13O43567 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF13O43567 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF13O43567 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF13O43567 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF13O43567 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF13O43567 AC004951.3-201ENST00000418645 1148 ntBASIC17.02■□□□□ 0.32
RNF13O43567 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF13O43567 AL158047.1-201ENST00000445918 881 ntBASIC17.02■□□□□ 0.32
RNF13O43567 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RNF13O43567 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.02■□□□□ 0.32
RNF13O43567 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RNF13O43567 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.02■□□□□ 0.31
RNF13O43567 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF13O43567 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RNF13O43567 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF13O43567 KRT8P11-201ENST00000409686 1436 ntBASIC17.02■□□□□ 0.31
RNF13O43567 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.02■□□□□ 0.31
RNF13O43567 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF13O43567 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF13O43567 RCC2P6-201ENST00000526625 1557 ntBASIC17.02■□□□□ 0.31
RNF13O43567 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF13O43567 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RNF13O43567 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF13O43567 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF13O43567 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RNF13O43567 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF13O43567 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RNF13O43567 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RNF13O43567 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF13O43567 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF13O43567 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF13O43567 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RNF13O43567 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF13O43567 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RNF13O43567 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF13O43567 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RNF13O43567 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF13O43567 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.01■□□□□ 0.31
RNF13O43567 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.01■□□□□ 0.31
RNF13O43567 AL135905.2-201ENST00000584934 1404 ntBASIC17.01■□□□□ 0.31
RNF13O43567 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RNF13O43567 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF13O43567 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RNF13O43567 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF13O43567 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF13O43567 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
RNF13O43567 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF13O43567 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms