Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC2O43543 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC2O43543 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC2O43543 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC2O43543 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
XRCC2O43543 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC2O43543 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC2O43543 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC2O43543 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.26■□□□□ 0.19
XRCC2O43543 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
XRCC2O43543 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
XRCC2O43543 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.25■□□□□ 0.19
XRCC2O43543 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
XRCC2O43543 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
XRCC2O43543 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
XRCC2O43543 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.25■□□□□ 0.19
XRCC2O43543 MFAP1P1-201ENST00000442257 1255 ntBASIC16.25■□□□□ 0.19
XRCC2O43543 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.25■□□□□ 0.19
XRCC2O43543 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.25■□□□□ 0.19
XRCC2O43543 SLC25A1P4-201ENST00000567977 778 ntBASIC16.25■□□□□ 0.19
XRCC2O43543 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.25■□□□□ 0.19
XRCC2O43543 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.25■□□□□ 0.19
XRCC2O43543 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.25■□□□□ 0.19
XRCC2O43543 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.25■□□□□ 0.19
XRCC2O43543 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
XRCC2O43543 TMEM191A-211ENST00000637163 1067 ntBASIC16.25■□□□□ 0.19
XRCC2O43543 MYC-208ENST00000641036 567 ntBASIC16.25■□□□□ 0.19
XRCC2O43543 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.25■□□□□ 0.19
XRCC2O43543 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.25■□□□□ 0.19
XRCC2O43543 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 WIZP1-201ENST00000531444 2299 ntBASIC16.25■□□□□ 0.19
XRCC2O43543 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.25■□□□□ 0.19
XRCC2O43543 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
XRCC2O43543 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
XRCC2O43543 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.24■□□□□ 0.19
XRCC2O43543 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
XRCC2O43543 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
XRCC2O43543 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.24■□□□□ 0.19
XRCC2O43543 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.24■□□□□ 0.19
XRCC2O43543 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
XRCC2O43543 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.24■□□□□ 0.19
XRCC2O43543 AC097488.1-201ENST00000507834 756 ntBASIC16.24■□□□□ 0.19
XRCC2O43543 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.24■□□□□ 0.19
XRCC2O43543 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.24■□□□□ 0.19
XRCC2O43543 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.24■□□□□ 0.19
XRCC2O43543 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.24■□□□□ 0.19
XRCC2O43543 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.24■□□□□ 0.19
XRCC2O43543 AC026471.5-201ENST00000615068 467 ntBASIC16.24■□□□□ 0.19
XRCC2O43543 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.24■□□□□ 0.19
XRCC2O43543 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.24■□□□□ 0.19
XRCC2O43543 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
XRCC2O43543 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.24■□□□□ 0.19
XRCC2O43543 MTMR9LP-203ENST00000426597 1545 ntBASIC16.24■□□□□ 0.19
XRCC2O43543 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
XRCC2O43543 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.24■□□□□ 0.19
XRCC2O43543 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
XRCC2O43543 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
XRCC2O43543 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.23■□□□□ 0.19
XRCC2O43543 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.23■□□□□ 0.19
XRCC2O43543 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
XRCC2O43543 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
XRCC2O43543 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
XRCC2O43543 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
XRCC2O43543 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.23■□□□□ 0.19
XRCC2O43543 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
XRCC2O43543 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
XRCC2O43543 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
XRCC2O43543 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
XRCC2O43543 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.23■□□□□ 0.19
XRCC2O43543 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.23■□□□□ 0.19
XRCC2O43543 CA15P1-201ENST00000481698 905 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms