Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.57■□□□□ 0.88
CCP110O43303 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.57■□□□□ 0.88
CCP110O43303 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.57■□□□□ 0.88
CCP110O43303 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCP110O43303 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCP110O43303 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.56■□□□□ 0.88
CCP110O43303 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCP110O43303 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.56■□□□□ 0.88
CCP110O43303 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCP110O43303 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCP110O43303 AC008403.3-201ENST00000598924 454 ntBASIC20.56■□□□□ 0.88
CCP110O43303 AL121906.2-201ENST00000621597 723 ntBASIC20.56■□□□□ 0.88
CCP110O43303 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.56■□□□□ 0.88
CCP110O43303 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CCP110O43303 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.56■□□□□ 0.88
CCP110O43303 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.56■□□□□ 0.88
CCP110O43303 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCP110O43303 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCP110O43303 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.55■□□□□ 0.88
CCP110O43303 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
CCP110O43303 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.55■□□□□ 0.88
CCP110O43303 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CCP110O43303 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.55■□□□□ 0.88
CCP110O43303 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.55■□□□□ 0.88
CCP110O43303 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.55■□□□□ 0.88
CCP110O43303 AC126763.1-201ENST00000552015 2118 ntBASIC20.55■□□□□ 0.88
CCP110O43303 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCP110O43303 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.55■□□□□ 0.88
CCP110O43303 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.55■□□□□ 0.88
CCP110O43303 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.55■□□□□ 0.88
CCP110O43303 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCP110O43303 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCP110O43303 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.54■□□□□ 0.88
CCP110O43303 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.54■□□□□ 0.88
CCP110O43303 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.54■□□□□ 0.88
CCP110O43303 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.54■□□□□ 0.88
CCP110O43303 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCP110O43303 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.54■□□□□ 0.88
CCP110O43303 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
CCP110O43303 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
CCP110O43303 SIRPAP1-201ENST00000448467 1770 ntBASIC20.54■□□□□ 0.88
CCP110O43303 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CCP110O43303 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CCP110O43303 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.53■□□□□ 0.88
CCP110O43303 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCP110O43303 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.53■□□□□ 0.88
CCP110O43303 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCP110O43303 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.53■□□□□ 0.88
CCP110O43303 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCP110O43303 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.53■□□□□ 0.88
CCP110O43303 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCP110O43303 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCP110O43303 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCP110O43303 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCP110O43303 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCP110O43303 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.53■□□□□ 0.88
CCP110O43303 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.53■□□□□ 0.88
CCP110O43303 SLC25A6P5-201ENST00000435663 894 ntBASIC20.53■□□□□ 0.88
CCP110O43303 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
CCP110O43303 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.53■□□□□ 0.88
CCP110O43303 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCP110O43303 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCP110O43303 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.53■□□□□ 0.88
CCP110O43303 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.53■□□□□ 0.88
CCP110O43303 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms