Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA5O15230 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.31■□□□□ 0.36
LAMA5O15230 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LAMA5O15230 AC025062.2-201ENST00000605477 670 ntBASIC17.31■□□□□ 0.36
LAMA5O15230 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LAMA5O15230 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LAMA5O15230 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA5O15230 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA5O15230 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LAMA5O15230 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.3■□□□□ 0.36
LAMA5O15230 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 AC004832.2-201ENST00000426397 482 ntBASIC17.3■□□□□ 0.36
LAMA5O15230 MCCD1P1-208ENST00000445732 328 ntBASIC17.3■□□□□ 0.36
LAMA5O15230 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.3■□□□□ 0.36
LAMA5O15230 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
LAMA5O15230 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA5O15230 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.3■□□□□ 0.36
LAMA5O15230 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LAMA5O15230 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LAMA5O15230 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.3■□□□□ 0.36
LAMA5O15230 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.29■□□□□ 0.36
LAMA5O15230 AC005336.2-201ENST00000593183 939 ntBASIC17.29■□□□□ 0.36
LAMA5O15230 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.29■□□□□ 0.36
LAMA5O15230 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.29■□□□□ 0.36
LAMA5O15230 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA5O15230 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LAMA5O15230 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA5O15230 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.29■□□□□ 0.36
LAMA5O15230 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA5O15230 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LAMA5O15230 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.29■□□□□ 0.36
LAMA5O15230 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LAMA5O15230 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.29■□□□□ 0.36
LAMA5O15230 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LAMA5O15230 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA5O15230 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA5O15230 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA5O15230 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.29■□□□□ 0.36
LAMA5O15230 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.29■□□□□ 0.36
LAMA5O15230 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LAMA5O15230 AC010240.3-201ENST00000607688 395 ntBASIC17.29■□□□□ 0.36
LAMA5O15230 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA5O15230 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA5O15230 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LAMA5O15230 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.29■□□□□ 0.36
LAMA5O15230 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
LAMA5O15230 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 MIR3180-5-201ENST00000583743 153 ntBASIC17.28■□□□□ 0.36
LAMA5O15230 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.28■□□□□ 0.36
LAMA5O15230 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LAMA5O15230 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMA5O15230 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LAMA5O15230 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.28■□□□□ 0.36
LAMA5O15230 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.28■□□□□ 0.36
LAMA5O15230 MIR1199-201ENST00000621445 119 ntBASIC17.28■□□□□ 0.36
LAMA5O15230 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.28■□□□□ 0.36
LAMA5O15230 AC004817.3-201ENST00000602957 2129 ntBASIC17.28■□□□□ 0.36
LAMA5O15230 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LAMA5O15230 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.28■□□□□ 0.36
LAMA5O15230 AC106028.4-201ENST00000614509 607 ntBASIC17.28■□□□□ 0.36
LAMA5O15230 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMA5O15230 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LAMA5O15230 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.28■□□□□ 0.36
LAMA5O15230 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LAMA5O15230 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA5O15230 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.27■□□□□ 0.36
LAMA5O15230 COX20P2-201ENST00000452636 358 ntBASIC17.27■□□□□ 0.36
LAMA5O15230 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA5O15230 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.27■□□□□ 0.36
LAMA5O15230 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA5O15230 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA5O15230 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LAMA5O15230 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LAMA5O15230 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.27■□□□□ 0.36
LAMA5O15230 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LAMA5O15230 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LAMA5O15230 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LAMA5O15230 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.27■□□□□ 0.35
LAMA5O15230 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.27■□□□□ 0.35
LAMA5O15230 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LAMA5O15230 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms