Protein–RNA interactions for Protein: O14828

SCAMP3, Secretory carrier-associated membrane protein 3, humanhuman

Known RBP Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3O14828 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCAMP3O14828 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCAMP3O14828 AL161938.1-201ENST00000569833 2180 ntBASIC19.33■□□□□ 0.68
SCAMP3O14828 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCAMP3O14828 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCAMP3O14828 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCAMP3O14828 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAMP3O14828 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SCAMP3O14828 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAMP3O14828 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.32■□□□□ 0.68
SCAMP3O14828 HCG4P8-203ENST00000443049 980 ntBASIC19.32■□□□□ 0.68
SCAMP3O14828 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.32■□□□□ 0.68
SCAMP3O14828 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 AC069148.1-201ENST00000608741 768 ntBASIC19.32■□□□□ 0.68
SCAMP3O14828 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAMP3O14828 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAMP3O14828 KRT8P32-201ENST00000512863 1461 ntBASIC19.32■□□□□ 0.68
SCAMP3O14828 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAMP3O14828 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.32■□□□□ 0.68
SCAMP3O14828 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCAMP3O14828 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SCAMP3O14828 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SCAMP3O14828 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SCAMP3O14828 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 AL645929.1-201ENST00000420084 975 ntBASIC19.31■□□□□ 0.68
SCAMP3O14828 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.31■□□□□ 0.68
SCAMP3O14828 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.31■□□□□ 0.68
SCAMP3O14828 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SCAMP3O14828 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SCAMP3O14828 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.31■□□□□ 0.68
SCAMP3O14828 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.31■□□□□ 0.68
SCAMP3O14828 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.31■□□□□ 0.68
SCAMP3O14828 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCAMP3O14828 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP3O14828 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SCAMP3O14828 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP3O14828 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.3■□□□□ 0.68
SCAMP3O14828 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP3O14828 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP3O14828 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.3■□□□□ 0.68
SCAMP3O14828 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SCAMP3O14828 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP3O14828 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP3O14828 AC012313.10-201ENST00000623509 926 ntBASIC19.3■□□□□ 0.68
SCAMP3O14828 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SCAMP3O14828 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SCAMP3O14828 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP3O14828 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.3■□□□□ 0.68
SCAMP3O14828 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.3■□□□□ 0.68
SCAMP3O14828 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SCAMP3O14828 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SCAMP3O14828 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP3O14828 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCAMP3O14828 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.29■□□□□ 0.68
SCAMP3O14828 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.29■□□□□ 0.68
SCAMP3O14828 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SCAMP3O14828 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SCAMP3O14828 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.29■□□□□ 0.68
SCAMP3O14828 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.29■□□□□ 0.68
SCAMP3O14828 AL121894.2-201ENST00000602977 491 ntBASIC19.29■□□□□ 0.68
SCAMP3O14828 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.29■□□□□ 0.68
SCAMP3O14828 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCAMP3O14828 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SCAMP3O14828 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SCAMP3O14828 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCAMP3O14828 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SCAMP3O14828 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP3O14828 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SCAMP3O14828 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP3O14828 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCAMP3O14828 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms