Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD1O14646 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHD1O14646 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC30.22■■■□□ 2.43
CHD1O14646 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC30.22■■■□□ 2.43
CHD1O14646 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC30.21■■■□□ 2.43
CHD1O14646 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CHD1O14646 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD1O14646 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CHD1O14646 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD1O14646 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD1O14646 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CHD1O14646 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD1O14646 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC30.21■■■□□ 2.43
CHD1O14646 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
CHD1O14646 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHD1O14646 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CHD1O14646 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC30.2■■■□□ 2.43
CHD1O14646 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHD1O14646 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC30.2■■■□□ 2.43
CHD1O14646 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CHD1O14646 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CHD1O14646 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
CHD1O14646 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1O14646 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1O14646 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC30.19■■■□□ 2.42
CHD1O14646 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1O14646 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC30.19■■■□□ 2.42
CHD1O14646 MCCD1P2-201ENST00000423228 335 ntBASIC30.19■■■□□ 2.42
CHD1O14646 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC30.19■■■□□ 2.42
CHD1O14646 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC30.19■■■□□ 2.42
CHD1O14646 ANKRD20A8P-203ENST00000641373 517 ntBASIC30.19■■■□□ 2.42
CHD1O14646 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1O14646 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1O14646 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1O14646 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC30.19■■■□□ 2.42
CHD1O14646 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC30.19■■■□□ 2.42
CHD1O14646 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CHD1O14646 KLK8-202ENST00000320838 456 ntTSL 5 BASIC30.19■■■□□ 2.42
CHD1O14646 AL645939.2-201ENST00000427340 991 ntBASIC30.19■■■□□ 2.42
CHD1O14646 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC30.19■■■□□ 2.42
CHD1O14646 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC30.19■■■□□ 2.42
CHD1O14646 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHD1O14646 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC30.19■■■□□ 2.42
CHD1O14646 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC30.18■■■□□ 2.42
CHD1O14646 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
CHD1O14646 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHD1O14646 ABCD1P5-201ENST00000445663 754 ntBASIC30.18■■■□□ 2.42
CHD1O14646 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC30.18■■■□□ 2.42
CHD1O14646 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
CHD1O14646 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHD1O14646 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHD1O14646 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC30.17■■■□□ 2.42
CHD1O14646 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHD1O14646 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CHD1O14646 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC30.17■■■□□ 2.42
CHD1O14646 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC30.17■■■□□ 2.42
CHD1O14646 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC30.17■■■□□ 2.42
CHD1O14646 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC30.17■■■□□ 2.42
CHD1O14646 AC002310.6-201ENST00000624451 1377 ntBASIC30.17■■■□□ 2.42
CHD1O14646 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
CHD1O14646 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
CHD1O14646 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC30.17■■■□□ 2.42
CHD1O14646 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC30.17■■■□□ 2.42
CHD1O14646 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
CHD1O14646 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 SYS1-203ENST00000414310 795 ntTSL 3 BASIC30.16■■■□□ 2.42
CHD1O14646 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC30.16■■■□□ 2.42
CHD1O14646 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC30.16■■■□□ 2.42
CHD1O14646 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
CHD1O14646 AC107918.4-202ENST00000641623 219 ntBASIC30.16■■■□□ 2.42
CHD1O14646 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC30.16■■■□□ 2.42
CHD1O14646 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
CHD1O14646 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CHD1O14646 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
CHD1O14646 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC30.16■■■□□ 2.42
CHD1O14646 MIR770-201ENST00000390219 98 ntBASIC30.16■■■□□ 2.42
CHD1O14646 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CHD1O14646 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC30.16■■■□□ 2.42
CHD1O14646 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CHD1O14646 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC30.16■■■□□ 2.42
CHD1O14646 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
CHD1O14646 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC30.16■■■□□ 2.42
CHD1O14646 AC064836.3-201ENST00000607928 673 ntBASIC30.16■■■□□ 2.42
CHD1O14646 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHD1O14646 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC30.15■■■□□ 2.42
CHD1O14646 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC30.15■■■□□ 2.42
CHD1O14646 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHD1O14646 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CHD1O14646 INIP-202ENST00000374236 874 ntTSL 2 BASIC30.15■■■□□ 2.42
CHD1O14646 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHD1O14646 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC30.15■■■□□ 2.42
CHD1O14646 MTDHP4-201ENST00000600287 670 ntBASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms