Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA3F8WFD2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.03■□□□□ 0.32
NPIPA3F8WFD2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPA3F8WFD2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 NEK4P2-201ENST00000580004 1012 ntBASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 AC008622.2-201ENST00000617006 1229 ntBASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPA3F8WFD2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.02■□□□□ 0.31
NPIPA3F8WFD2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
NPIPA3F8WFD2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPA3F8WFD2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
NPIPA3F8WFD2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPA3F8WFD2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
NPIPA3F8WFD2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.02■□□□□ 0.31
NPIPA3F8WFD2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPA3F8WFD2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPA3F8WFD2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 PCED1CP-201ENST00000419887 785 ntBASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 KRT18P38-201ENST00000449496 1282 ntBASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 GCSHP2-201ENST00000560971 527 ntBASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 CR769767.2-201ENST00000622735 460 ntBASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 AL121956.5-201ENST00000625261 221 ntBASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 AP000550.4-202ENST00000639755 178 ntBASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPA3F8WFD2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 IRX1P1-201ENST00000438849 1838 ntBASIC17■□□□□ 0.31
NPIPA3F8WFD2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 FP475955.4-201ENST00000623131 1990 ntBASIC17■□□□□ 0.31
NPIPA3F8WFD2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17■□□□□ 0.31
NPIPA3F8WFD2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA3F8WFD2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA3F8WFD2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms