Protein–RNA interactions for Protein: A6NKX1

FAM223B, Protein FAM223B, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM223BA6NKX1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 WWOX-216ENST00000569818 525 ntBASIC14.54□□□□□ -0.08
FAM223BA6NKX1 MIR4674-201ENST00000582457 87 ntBASIC14.54□□□□□ -0.08
FAM223BA6NKX1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 AC073912.3-201ENST00000624414 853 ntBASIC14.54□□□□□ -0.08
FAM223BA6NKX1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 LINC01568-207ENST00000641790 1380 ntBASIC14.54□□□□□ -0.08
FAM223BA6NKX1 KRT8P9-201ENST00000558927 1449 ntBASIC14.54□□□□□ -0.08
FAM223BA6NKX1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FAM223BA6NKX1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 KRT8P45-201ENST00000414328 1447 ntBASIC14.53□□□□□ -0.08
FAM223BA6NKX1 KRT8P7-201ENST00000533003 1432 ntBASIC14.53□□□□□ -0.08
FAM223BA6NKX1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 AC087499.1-201ENST00000418141 1075 ntBASIC14.53□□□□□ -0.08
FAM223BA6NKX1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.53□□□□□ -0.08
FAM223BA6NKX1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 KRT18P41-201ENST00000518924 1277 ntBASIC14.53□□□□□ -0.08
FAM223BA6NKX1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FAM223BA6NKX1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 AC036111.1-201ENST00000533973 1582 ntBASIC14.52□□□□□ -0.08
FAM223BA6NKX1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
FAM223BA6NKX1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 AC145285.6-201ENST00000604632 637 ntBASIC14.52□□□□□ -0.09
FAM223BA6NKX1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 AC004408.2-201ENST00000623613 2777 ntBASIC14.52□□□□□ -0.09
FAM223BA6NKX1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FAM223BA6NKX1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.51□□□□□ -0.09
FAM223BA6NKX1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FAM223BA6NKX1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
FAM223BA6NKX1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.51□□□□□ -0.09
FAM223BA6NKX1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.51□□□□□ -0.09
FAM223BA6NKX1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FAM223BA6NKX1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FAM223BA6NKX1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FAM223BA6NKX1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms