Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM200CA6NKL6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM200CA6NKL6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM200CA6NKL6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM200CA6NKL6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM200CA6NKL6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM200CA6NKL6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TMEM200CA6NKL6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 AC098818.2-201ENST00000564925 2320 ntBASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM200CA6NKL6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 MIR564-202ENST00000385049 94 ntBASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 MYC-208ENST00000641036 567 ntBASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEM200CA6NKL6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 AP000523.1-201ENST00000398242 1049 ntBASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 KRT18P38-201ENST00000449496 1282 ntBASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 HEIH-201ENST00000623091 1652 ntBASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM200CA6NKL6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms