Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC189A1A4V9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 TSPY23P-201ENST00000440136 739 ntBASIC18.69■□□□□ 0.58
CCDC189A1A4V9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 AL445675.2-201ENST00000620291 557 ntBASIC18.69■□□□□ 0.58
CCDC189A1A4V9 AC020763.4-201ENST00000623414 4170 ntBASIC18.69■□□□□ 0.58
CCDC189A1A4V9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC189A1A4V9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 RNA5SP413-201ENST00000516373 109 ntBASIC18.68■□□□□ 0.58
CCDC189A1A4V9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 KRT8P41-201ENST00000533985 1514 ntBASIC18.68■□□□□ 0.58
CCDC189A1A4V9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC189A1A4V9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC189A1A4V9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms