Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 KRT8P32-201ENST00000512863 1461 ntBASIC13.23□□□□□ -0.29
TRBV27A0A0K0K1C4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 AL050303.2-201ENST00000619798 666 ntBASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 HLA-A-209ENST00000638375 975 ntBASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.22□□□□□ -0.29
TRBV27A0A0K0K1C4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 KRT8P41-201ENST00000533985 1514 ntBASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRBV27A0A0K0K1C4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms