Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 AC060766.5-201ENST00000590539 871 ntBASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV5A0A0B4J249 PKD1P1-201ENST00000458669 6805 ntBASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 AC135776.1-201ENST00000319817 2481 ntBASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 OR6D1P-202ENST00000641007 5290 ntBASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 RCC2P6-201ENST00000526625 1557 ntBASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 SLC29A4P1-201ENST00000398760 971 ntBASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 AC006970.2-201ENST00000450065 779 ntBASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 AC008687.6-201ENST00000596318 630 ntBASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 HLA-A-209ENST00000638375 975 ntBASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 MYC-209ENST00000641252 345 ntBASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV5A0A0B4J249 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 AC012313.1-201ENST00000593393 3059 ntBASIC14.52□□□□□ -0.08
TRAV5A0A0B4J249 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms