Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 AC026471.1-201ENST00000564629 3026 ntBASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 AL353807.1-201ENST00000427475 662 ntBASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 RPPH1-201ENST00000516869 333 ntBASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV27A0A087WT01 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV27A0A087WT01 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
TRAV27A0A087WT01 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV27A0A087WT01 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.96■□□□□ 0.3
TRAV27A0A087WT01 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAV27A0A087WT01 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAV27A0A087WT01 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV27A0A087WT01 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV27A0A087WT01 KRT8P3-201ENST00000519669 1449 ntBASIC16.96■□□□□ 0.3
TRAV27A0A087WT01 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 HTR7P1-202ENST00000624664 4411 ntBASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 AC011298.2-201ENST00000617989 482 ntBASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV27A0A087WT01 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 AC008040.2-201ENST00000461049 708 ntBASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 AF186192.3-201ENST00000583427 947 ntBASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV27A0A087WT01 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms