Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SPCS1Q9Y6A9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 GFER-205ENST00000569451 517 ntTSL 5 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 AL023806.1-201ENST00000603994 1649 ntBASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 MIR600HG-201ENST00000449175 5984 ntBASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SPCS1Q9Y6A9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 TEX21P-204ENST00000641479 1693 ntBASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
SPCS1Q9Y6A9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 PP12613-201ENST00000424958 2230 ntBASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 AC009102.2-201ENST00000606772 1639 ntBASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPCS1Q9Y6A9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 AF131216.4-201ENST00000638924 1588 ntBASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
SPCS1Q9Y6A9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms