Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 AL050303.2-201ENST00000619798 666 ntBASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGB1Q9Y5G3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGB1Q9Y5G3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 AL645608.8-201ENST00000606034 2086 ntBASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 KRT8P8-201ENST00000434750 1448 ntBASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 SLC29A4P1-201ENST00000398760 971 ntBASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 AC093827.2-201ENST00000512654 315 ntBASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 PCDHA12-202ENST00000613593 2588 ntBASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGB1Q9Y5G3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 AL138781.1-201ENST00000566567 1274 ntBASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGB1Q9Y5G3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB1Q9Y5G3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms