Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB6Q9Y5F9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB6Q9Y5F9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGB6Q9Y5F9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB6Q9Y5F9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGB6Q9Y5F9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 HMGA1P5-201ENST00000412453 271 ntBASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 AC008040.2-201ENST00000461049 708 ntBASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 CA15P1-201ENST00000481698 905 ntBASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 KRT18P35-201ENST00000510488 1269 ntBASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGB6Q9Y5F9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 AC018470.1-201ENST00000624790 3129 ntBASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 KRT18P57-201ENST00000443599 1254 ntBASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 ATP5G1P1-201ENST00000448724 379 ntBASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 ECEL1P2-202ENST00000465689 757 ntBASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGB6Q9Y5F9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 AL032819.2-201ENST00000624543 2162 ntBASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 ARMC10P1-201ENST00000313754 855 ntBASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 FAM87A-204ENST00000613235 858 ntBASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 LINC01465-201ENST00000408887 1940 ntBASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB6Q9Y5F9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 BX664615.1-201ENST00000443558 458 ntBASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 TSPY17P-201ENST00000450329 467 ntBASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHGB6Q9Y5F9 DUX4L26-201ENST00000489078 1255 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms