Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
PCDHA4Q9UN74 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 AC005521.1-201ENST00000393351 872 ntBASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 AL137013.1-201ENST00000432946 1228 ntBASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 AC141257.4-201ENST00000634557 245 ntBASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 AC136944.6-201ENST00000634818 245 ntBASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 HOXB1-202ENST00000577092 1414 ntBASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 AC073508.3-201ENST00000619697 1419 ntBASIC21.35■■□□□ 1.01
PCDHA4Q9UN74 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 LIN28AP1-201ENST00000429574 405 ntBASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 AC112777.1-201ENST00000540175 1423 ntBASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA4Q9UN74 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 KRT8P7-201ENST00000533003 1432 ntBASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 KRT18P23-201ENST00000435622 1283 ntBASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 NEK4P2-201ENST00000580004 1012 ntBASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA4Q9UN74 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.33■■□□□ 1
PCDHA4Q9UN74 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA4Q9UN74 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.33■■□□□ 1
PCDHA4Q9UN74 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHA4Q9UN74 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.33■■□□□ 1
PCDHA4Q9UN74 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA4Q9UN74 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA4Q9UN74 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
PCDHA4Q9UN74 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.33■■□□□ 1
PCDHA4Q9UN74 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.32■■□□□ 1
PCDHA4Q9UN74 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 WIZP1-201ENST00000531444 2299 ntBASIC21.32■■□□□ 1
PCDHA4Q9UN74 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
PCDHA4Q9UN74 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHA4Q9UN74 ATP5G1P1-201ENST00000448724 379 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms