Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 TNXA-203ENST00000507684 2038 ntBASIC20.01■□□□□ 0.79
SIX4Q9UIU6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 KRT8P50-201ENST00000562022 1438 ntBASIC20.01■□□□□ 0.79
SIX4Q9UIU6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIX4Q9UIU6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX4Q9UIU6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SIX4Q9UIU6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20■□□□□ 0.79
SIX4Q9UIU6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIX4Q9UIU6 ANO7L1-203ENST00000602586 1720 ntBASIC20■□□□□ 0.79
SIX4Q9UIU6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SIX4Q9UIU6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20■□□□□ 0.79
SIX4Q9UIU6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX4Q9UIU6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20■□□□□ 0.79
SIX4Q9UIU6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIX4Q9UIU6 SPDYE15P-201ENST00000424157 909 ntBASIC20■□□□□ 0.79
SIX4Q9UIU6 GRAMD4P1-201ENST00000435181 1110 ntBASIC20■□□□□ 0.79
SIX4Q9UIU6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20■□□□□ 0.79
SIX4Q9UIU6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20■□□□□ 0.79
SIX4Q9UIU6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20■□□□□ 0.79
SIX4Q9UIU6 AC104390.1-201ENST00000555663 520 ntBASIC20■□□□□ 0.79
SIX4Q9UIU6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIX4Q9UIU6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX4Q9UIU6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX4Q9UIU6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIX4Q9UIU6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SIX4Q9UIU6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.99■□□□□ 0.79
SIX4Q9UIU6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 NTF6B-201ENST00000591913 560 ntBASIC19.99■□□□□ 0.79
SIX4Q9UIU6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIX4Q9UIU6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.98■□□□□ 0.79
SIX4Q9UIU6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 AL359075.1-203ENST00000462729 1002 ntBASIC19.98■□□□□ 0.79
SIX4Q9UIU6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 MYC-208ENST00000641036 567 ntBASIC19.98■□□□□ 0.79
SIX4Q9UIU6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIX4Q9UIU6 AC093503.3-201ENST00000624917 2352 ntBASIC19.98■□□□□ 0.79
SIX4Q9UIU6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms