Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HACD3Q9P035 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HACD3Q9P035 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HACD3Q9P035 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.94■□□□□ 0.62
HACD3Q9P035 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HACD3Q9P035 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.94■□□□□ 0.62
HACD3Q9P035 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
HACD3Q9P035 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HACD3Q9P035 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HACD3Q9P035 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HACD3Q9P035 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HACD3Q9P035 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HACD3Q9P035 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HACD3Q9P035 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.93■□□□□ 0.62
HACD3Q9P035 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.93■□□□□ 0.62
HACD3Q9P035 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.93■□□□□ 0.62
HACD3Q9P035 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.93■□□□□ 0.62
HACD3Q9P035 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.93■□□□□ 0.62
HACD3Q9P035 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.93■□□□□ 0.62
HACD3Q9P035 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HACD3Q9P035 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 AL512353.2-201ENST00000448759 1962 ntBASIC18.93■□□□□ 0.62
HACD3Q9P035 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HACD3Q9P035 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.93■□□□□ 0.62
HACD3Q9P035 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HACD3Q9P035 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 KRT8P32-201ENST00000512863 1461 ntBASIC18.92■□□□□ 0.62
HACD3Q9P035 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.92■□□□□ 0.62
HACD3Q9P035 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.92■□□□□ 0.62
HACD3Q9P035 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.92■□□□□ 0.62
HACD3Q9P035 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.92■□□□□ 0.62
HACD3Q9P035 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HACD3Q9P035 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HACD3Q9P035 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.92■□□□□ 0.62
HACD3Q9P035 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HACD3Q9P035 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.92■□□□□ 0.62
HACD3Q9P035 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
HACD3Q9P035 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.91■□□□□ 0.62
HACD3Q9P035 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.91■□□□□ 0.62
HACD3Q9P035 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
HACD3Q9P035 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.91■□□□□ 0.62
HACD3Q9P035 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.91■□□□□ 0.62
HACD3Q9P035 MMP23A-201ENST00000234610 1017 ntBASIC18.91■□□□□ 0.62
HACD3Q9P035 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HACD3Q9P035 AL390955.1-201ENST00000428694 934 ntBASIC18.91■□□□□ 0.62
HACD3Q9P035 CCR12P-201ENST00000446203 998 ntBASIC18.91■□□□□ 0.62
HACD3Q9P035 TSPY17P-201ENST00000450329 467 ntBASIC18.91■□□□□ 0.62
HACD3Q9P035 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.91■□□□□ 0.62
HACD3Q9P035 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.91■□□□□ 0.62
HACD3Q9P035 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.91■□□□□ 0.62
HACD3Q9P035 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 HTR7P1-202ENST00000624664 4411 ntBASIC18.91■□□□□ 0.62
HACD3Q9P035 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
HACD3Q9P035 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HACD3Q9P035 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HACD3Q9P035 AC093525.10-201ENST00000625130 1569 ntBASIC18.9■□□□□ 0.62
HACD3Q9P035 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HACD3Q9P035 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.9■□□□□ 0.62
HACD3Q9P035 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HACD3Q9P035 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.9■□□□□ 0.62
HACD3Q9P035 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HACD3Q9P035 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.9■□□□□ 0.62
HACD3Q9P035 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms