Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 AC140113.3-201ENST00000605663 199 ntBASIC17.36■□□□□ 0.37
HPF1Q9NWY4 AC139887.4-201ENST00000607877 719 ntBASIC17.36■□□□□ 0.37
HPF1Q9NWY4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 AL031432.5-201ENST00000641059 760 ntBASIC17.36■□□□□ 0.37
HPF1Q9NWY4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HPF1Q9NWY4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 MIR4674-201ENST00000582457 87 ntBASIC17.35■□□□□ 0.37
HPF1Q9NWY4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 AC008622.2-201ENST00000617006 1229 ntBASIC17.35■□□□□ 0.37
HPF1Q9NWY4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.35■□□□□ 0.37
HPF1Q9NWY4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 AC093484.2-201ENST00000580996 2166 ntBASIC17.35■□□□□ 0.37
HPF1Q9NWY4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.35■□□□□ 0.37
HPF1Q9NWY4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 ARMC10P1-201ENST00000313754 855 ntBASIC17.34■□□□□ 0.37
HPF1Q9NWY4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 RNF152P1-201ENST00000397754 604 ntBASIC17.34■□□□□ 0.37
HPF1Q9NWY4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 IRX1P1-201ENST00000438849 1838 ntBASIC17.34■□□□□ 0.37
HPF1Q9NWY4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 YBX1P2-201ENST00000489612 999 ntBASIC17.34■□□□□ 0.37
HPF1Q9NWY4 KRT18P35-201ENST00000510488 1269 ntBASIC17.34■□□□□ 0.37
HPF1Q9NWY4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.34■□□□□ 0.37
HPF1Q9NWY4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 AL445228.2-201ENST00000605589 952 ntBASIC17.34■□□□□ 0.37
HPF1Q9NWY4 AL032819.2-201ENST00000624543 2162 ntBASIC17.34■□□□□ 0.37
HPF1Q9NWY4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HPF1Q9NWY4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HPF1Q9NWY4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPF1Q9NWY4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HPF1Q9NWY4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.33■□□□□ 0.37
HPF1Q9NWY4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HPF1Q9NWY4 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.33■□□□□ 0.37
HPF1Q9NWY4 GPAT2P1-201ENST00000444924 1672 ntBASIC17.33■□□□□ 0.37
HPF1Q9NWY4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HPF1Q9NWY4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 AC009947.2-201ENST00000444014 672 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms