Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LIN7CQ9NUP9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.57■□□□□ 0.08
LIN7CQ9NUP9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LIN7CQ9NUP9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms