Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
CISHQ9NSE2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.94■□□□□ 0.78
CISHQ9NSE2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CISHQ9NSE2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CISHQ9NSE2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CISHQ9NSE2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CISHQ9NSE2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CISHQ9NSE2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CISHQ9NSE2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 AC010203.1-204ENST00000548782 407 ntBASIC19.93■□□□□ 0.78
CISHQ9NSE2 AL512604.3-201ENST00000569583 964 ntBASIC19.93■□□□□ 0.78
CISHQ9NSE2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 AC005363.2-201ENST00000618631 242 ntBASIC19.93■□□□□ 0.78
CISHQ9NSE2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 AL020996.1-203ENST00000536896 2307 ntBASIC19.93■□□□□ 0.78
CISHQ9NSE2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CISHQ9NSE2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.93■□□□□ 0.78
CISHQ9NSE2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CISHQ9NSE2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CISHQ9NSE2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 AC034236.2-201ENST00000606662 1610 ntBASIC19.92■□□□□ 0.78
CISHQ9NSE2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 AC113347.1-201ENST00000413321 391 ntBASIC19.92■□□□□ 0.78
CISHQ9NSE2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.92■□□□□ 0.78
CISHQ9NSE2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CISHQ9NSE2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.91■□□□□ 0.78
CISHQ9NSE2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CISHQ9NSE2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CISHQ9NSE2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.9■□□□□ 0.78
CISHQ9NSE2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CISHQ9NSE2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CISHQ9NSE2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 WIZP1-201ENST00000531444 2299 ntBASIC19.9■□□□□ 0.78
CISHQ9NSE2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CISHQ9NSE2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms