Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A13Q9NSD5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 HTR7P1-201ENST00000538670 1336 ntBASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A13Q9NSD5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.64■□□□□ 0.42
SLC6A13Q9NSD5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC6A13Q9NSD5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC6A13Q9NSD5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC6A13Q9NSD5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 AC006058.3-201ENST00000606217 1069 ntBASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 AL353708.3-201ENST00000610272 989 ntBASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 AP000997.3-201ENST00000623333 2250 ntBASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 KRT8P45-201ENST00000414328 1447 ntBASIC17.64■□□□□ 0.41
SLC6A13Q9NSD5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 RCC2P3-201ENST00000418112 1537 ntBASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 ESPNP-201ENST00000270691 2015 ntBASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
SLC6A13Q9NSD5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SLC6A13Q9NSD5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
SLC6A13Q9NSD5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SLC6A13Q9NSD5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC6A13Q9NSD5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.62■□□□□ 0.41
SLC6A13Q9NSD5 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms