Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRDM9Q9NQV7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 GPAT2P1-201ENST00000444924 1672 ntBASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 RCN1P1-201ENST00000400413 996 ntBASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 AL023284.2-201ENST00000405850 579 ntBASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 FAM210CP-201ENST00000445714 574 ntBASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 MCCD1P1-208ENST00000445732 328 ntBASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.67■□□□□ 0.42
PRDM9Q9NQV7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 AC073508.3-201ENST00000619697 1419 ntBASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 KRT18P21-201ENST00000515767 1272 ntBASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 ANO7L1-203ENST00000602586 1720 ntBASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PRDM9Q9NQV7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 KRT8P45-201ENST00000414328 1447 ntBASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 AC112777.1-201ENST00000540175 1423 ntBASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PRDM9Q9NQV7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.64■□□□□ 0.42
PRDM9Q9NQV7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.64■□□□□ 0.42
PRDM9Q9NQV7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms