Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 FER1L4-210ENST00000615531 5998 ntBASIC17.02■□□□□ 0.32
HMG20AQ9NP66 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMG20AQ9NP66 IRX1P1-201ENST00000438849 1838 ntBASIC17.02■□□□□ 0.31
HMG20AQ9NP66 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 KRT16P6-202ENST00000425692 1426 ntBASIC17.02■□□□□ 0.31
HMG20AQ9NP66 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HMG20AQ9NP66 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 AC080080.1-201ENST00000625121 2420 ntBASIC17.01■□□□□ 0.31
HMG20AQ9NP66 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 AC069236.1-201ENST00000604339 616 ntBASIC17.01■□□□□ 0.31
HMG20AQ9NP66 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 AC231657.2-201ENST00000624556 255 ntBASIC17.01■□□□□ 0.31
HMG20AQ9NP66 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20AQ9NP66 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HMG20AQ9NP66 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17■□□□□ 0.31
HMG20AQ9NP66 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17■□□□□ 0.31
HMG20AQ9NP66 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17■□□□□ 0.31
HMG20AQ9NP66 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HMG20AQ9NP66 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17■□□□□ 0.31
HMG20AQ9NP66 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17■□□□□ 0.31
HMG20AQ9NP66 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17■□□□□ 0.31
HMG20AQ9NP66 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17■□□□□ 0.31
HMG20AQ9NP66 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17■□□□□ 0.31
HMG20AQ9NP66 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17■□□□□ 0.31
HMG20AQ9NP66 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17■□□□□ 0.31
HMG20AQ9NP66 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HMG20AQ9NP66 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17■□□□□ 0.31
HMG20AQ9NP66 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20AQ9NP66 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17■□□□□ 0.31
HMG20AQ9NP66 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.99■□□□□ 0.31
HMG20AQ9NP66 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
HMG20AQ9NP66 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HMG20AQ9NP66 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20AQ9NP66 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20AQ9NP66 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20AQ9NP66 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.99■□□□□ 0.31
HMG20AQ9NP66 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20AQ9NP66 AC007322.1-201ENST00000426983 750 ntBASIC16.99■□□□□ 0.31
HMG20AQ9NP66 CYP2T1P-201ENST00000432607 1285 ntBASIC16.99■□□□□ 0.31
HMG20AQ9NP66 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.99■□□□□ 0.31
HMG20AQ9NP66 AC008694.1-202ENST00000636953 945 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms