Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 KRT16P4-201ENST00000453883 522 ntBASIC21.75■■□□□ 1.07
EFCC1Q9HA90 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 AF228730.7-201ENST00000641842 219 ntBASIC21.75■■□□□ 1.07
EFCC1Q9HA90 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 SDHAP1-207ENST00000440850 2000 ntBASIC21.75■■□□□ 1.07
EFCC1Q9HA90 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.74■■□□□ 1.07
EFCC1Q9HA90 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 MIR574-201ENST00000385209 96 ntBASIC21.73■■□□□ 1.07
EFCC1Q9HA90 HLA-F-220ENST00000434407 884 ntBASIC21.73■■□□□ 1.07
EFCC1Q9HA90 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 AC079602.3-201ENST00000623931 403 ntBASIC21.73■■□□□ 1.07
EFCC1Q9HA90 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 AC036111.1-201ENST00000533973 1582 ntBASIC21.73■■□□□ 1.07
EFCC1Q9HA90 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EFCC1Q9HA90 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 AC099778.1-201ENST00000568593 1911 ntBASIC21.72■■□□□ 1.07
EFCC1Q9HA90 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 MIR662-201ENST00000384847 95 ntBASIC21.72■■□□□ 1.07
EFCC1Q9HA90 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 AC104819.1-201ENST00000504587 486 ntBASIC21.72■■□□□ 1.07
EFCC1Q9HA90 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 AL353801.3-201ENST00000609898 542 ntBASIC21.72■■□□□ 1.07
EFCC1Q9HA90 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EFCC1Q9HA90 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 AL023284.2-201ENST00000405850 579 ntBASIC21.71■■□□□ 1.07
EFCC1Q9HA90 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 TSPY12P-201ENST00000421279 868 ntBASIC21.71■■□□□ 1.07
EFCC1Q9HA90 AC092183.1-201ENST00000469884 875 ntBASIC21.71■■□□□ 1.07
EFCC1Q9HA90 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 AC138894.3-201ENST00000603787 634 ntBASIC21.71■■□□□ 1.07
EFCC1Q9HA90 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
EFCC1Q9HA90 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms