Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3BQ9H321 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.84■□□□□ 0.45
VCX3BQ9H321 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
VCX3BQ9H321 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.83■□□□□ 0.45
VCX3BQ9H321 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.83■□□□□ 0.45
VCX3BQ9H321 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
VCX3BQ9H321 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VCX3BQ9H321 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VCX3BQ9H321 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
VCX3BQ9H321 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VCX3BQ9H321 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VCX3BQ9H321 AC018553.1-201ENST00000616682 1458 ntBASIC17.83■□□□□ 0.45
VCX3BQ9H321 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
VCX3BQ9H321 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.83■□□□□ 0.45
VCX3BQ9H321 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3BQ9H321 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3BQ9H321 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3BQ9H321 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3BQ9H321 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3BQ9H321 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3BQ9H321 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3BQ9H321 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
VCX3BQ9H321 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3BQ9H321 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 SDHAP1-207ENST00000440850 2000 ntBASIC17.82■□□□□ 0.44
VCX3BQ9H321 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 AC012414.1-201ENST00000556676 535 ntBASIC17.82■□□□□ 0.44
VCX3BQ9H321 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 AL162727.3-201ENST00000635661 2787 ntBASIC17.82■□□□□ 0.44
VCX3BQ9H321 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.82■□□□□ 0.44
VCX3BQ9H321 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3BQ9H321 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.81■□□□□ 0.44
VCX3BQ9H321 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.81■□□□□ 0.44
VCX3BQ9H321 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 YBX1P1-201ENST00000445822 960 ntBASIC17.81■□□□□ 0.44
VCX3BQ9H321 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.81■□□□□ 0.44
VCX3BQ9H321 SLC7A5P1-201ENST00000568957 537 ntBASIC17.81■□□□□ 0.44
VCX3BQ9H321 AP001160.3-201ENST00000601484 763 ntBASIC17.81■□□□□ 0.44
VCX3BQ9H321 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.81■□□□□ 0.44
VCX3BQ9H321 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VCX3BQ9H321 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms