Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 SEC1P-202ENST00000473944 940 ntBASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 Z98044.1-201ENST00000632503 1764 ntBASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR3FQ9H1D9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 AC034236.2-201ENST00000606662 1610 ntBASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 SPDYE15P-201ENST00000424157 909 ntBASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR3FQ9H1D9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 AC087388.1-201ENST00000571370 1112 ntBASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 MYC-208ENST00000641036 567 ntBASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 HOXB1-202ENST00000577092 1414 ntBASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR3FQ9H1D9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.58■□□□□ 0.89
POLR3FQ9H1D9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR3FQ9H1D9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.58■□□□□ 0.88
POLR3FQ9H1D9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.58■□□□□ 0.88
POLR3FQ9H1D9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
POLR3FQ9H1D9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
POLR3FQ9H1D9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR3FQ9H1D9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.58■□□□□ 0.88
POLR3FQ9H1D9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms