Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF38Q9H0F5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF38Q9H0F5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 AC034236.2-201ENST00000606662 1610 ntBASIC19.37■□□□□ 0.69
RNF38Q9H0F5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 AL645929.1-201ENST00000420084 975 ntBASIC19.37■□□□□ 0.69
RNF38Q9H0F5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 HLA-F-220ENST00000434407 884 ntBASIC19.37■□□□□ 0.69
RNF38Q9H0F5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 AC010240.3-201ENST00000607688 395 ntBASIC19.37■□□□□ 0.69
RNF38Q9H0F5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 AL391807.1-203ENST00000604392 2365 ntBASIC19.37■□□□□ 0.69
RNF38Q9H0F5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF38Q9H0F5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 AC069148.1-201ENST00000608741 768 ntBASIC19.36■□□□□ 0.69
RNF38Q9H0F5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.36■□□□□ 0.69
RNF38Q9H0F5 HEIH-201ENST00000623091 1652 ntBASIC19.36■□□□□ 0.69
RNF38Q9H0F5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF38Q9H0F5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 AL357033.4-201ENST00000617703 1807 ntBASIC19.35■□□□□ 0.69
RNF38Q9H0F5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.35■□□□□ 0.69
RNF38Q9H0F5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 KRT18P56-201ENST00000507275 550 ntBASIC19.35■□□□□ 0.69
RNF38Q9H0F5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF38Q9H0F5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms