Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BPIFA3Q9BQP9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.73■□□□□ 0.91
BPIFA3Q9BQP9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 MYLKP1-201ENST00000509077 1580 ntBASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 AC008403.3-201ENST00000598924 454 ntBASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 MTDHP1-201ENST00000605323 784 ntBASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 AL445675.2-201ENST00000620291 557 ntBASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.72■□□□□ 0.91
BPIFA3Q9BQP9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 HTR7P1-201ENST00000538670 1336 ntBASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BPIFA3Q9BQP9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 FLJ13224-201ENST00000313737 1514 ntBASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BPIFA3Q9BQP9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.69■□□□□ 0.9
BPIFA3Q9BQP9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 RCC2P3-201ENST00000418112 1537 ntBASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 REXO1L9P-201ENST00000604264 2108 ntBASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms