Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM47Q9BQJ4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 AC034232.1-201ENST00000506026 1064 ntBASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 MIR3917-201ENST00000580971 93 ntBASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM47Q9BQJ4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 FAM86EP-206ENST00000510506 987 ntBASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 AC010240.3-201ENST00000607688 395 ntBASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM47Q9BQJ4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 AC079602.3-201ENST00000623931 403 ntBASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 AL121956.5-201ENST00000625261 221 ntBASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM47Q9BQJ4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 LINC01311-201ENST00000565162 1445 ntBASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 HBZP1-201ENST00000354915 429 ntBASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 SPDYE13P-201ENST00000445314 798 ntBASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 AL358472.4-201ENST00000633140 710 ntBASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 KRT8P50-201ENST00000562022 1438 ntBASIC21.72■■□□□ 1.07
TMEM47Q9BQJ4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM47Q9BQJ4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM47Q9BQJ4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.71■■□□□ 1.07
TMEM47Q9BQJ4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM47Q9BQJ4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TMEM47Q9BQJ4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM47Q9BQJ4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM47Q9BQJ4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms