Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.22■□□□□ 0.99
ARID3AQ99856 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ARID3AQ99856 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ARID3AQ99856 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.22■□□□□ 0.99
ARID3AQ99856 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.22■□□□□ 0.99
ARID3AQ99856 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 NOC2LP2-201ENST00000407594 1944 ntBASIC21.22■□□□□ 0.99
ARID3AQ99856 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.22■□□□□ 0.99
ARID3AQ99856 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.22■□□□□ 0.99
ARID3AQ99856 AP003097.1-201ENST00000530657 1135 ntBASIC21.22■□□□□ 0.99
ARID3AQ99856 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.22■□□□□ 0.99
ARID3AQ99856 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.22■□□□□ 0.99
ARID3AQ99856 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.22■□□□□ 0.99
ARID3AQ99856 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 AC116351.2-201ENST00000606540 1585 ntBASIC21.22■□□□□ 0.99
ARID3AQ99856 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.22■□□□□ 0.99
ARID3AQ99856 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.22■□□□□ 0.99
ARID3AQ99856 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.22■□□□□ 0.99
ARID3AQ99856 TMEM179-206ENST00000616017 1645 ntBASIC21.22■□□□□ 0.99
ARID3AQ99856 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ARID3AQ99856 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
ARID3AQ99856 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.21■□□□□ 0.99
ARID3AQ99856 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.21■□□□□ 0.99
ARID3AQ99856 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.21■□□□□ 0.99
ARID3AQ99856 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.21■□□□□ 0.99
ARID3AQ99856 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.21■□□□□ 0.99
ARID3AQ99856 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.21■□□□□ 0.99
ARID3AQ99856 AC233263.1-201ENST00000578059 224 ntBASIC21.21■□□□□ 0.99
ARID3AQ99856 AC009237.14-201ENST00000609975 1594 ntBASIC21.21■□□□□ 0.99
ARID3AQ99856 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.21■□□□□ 0.99
ARID3AQ99856 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ARID3AQ99856 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.21■□□□□ 0.99
ARID3AQ99856 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.21■□□□□ 0.99
ARID3AQ99856 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ARID3AQ99856 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
ARID3AQ99856 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ARID3AQ99856 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.2■□□□□ 0.98
ARID3AQ99856 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.2■□□□□ 0.98
ARID3AQ99856 AC084018.2-201ENST00000613093 2607 ntBASIC21.2■□□□□ 0.98
ARID3AQ99856 AC068418.2-201ENST00000577309 3703 ntBASIC21.2■□□□□ 0.98
ARID3AQ99856 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ARID3AQ99856 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.2■□□□□ 0.98
ARID3AQ99856 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.2■□□□□ 0.98
ARID3AQ99856 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.2■□□□□ 0.98
ARID3AQ99856 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.2■□□□□ 0.98
ARID3AQ99856 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.2■□□□□ 0.98
ARID3AQ99856 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.2■□□□□ 0.98
ARID3AQ99856 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ARID3AQ99856 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
ARID3AQ99856 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.19■□□□□ 0.98
ARID3AQ99856 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ARID3AQ99856 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms