Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS2Q99743 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS2Q99743 AC113410.3-201ENST00000623366 203 ntBASIC18.33■□□□□ 0.52
NPAS2Q99743 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS2Q99743 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.33■□□□□ 0.52
NPAS2Q99743 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NPAS2Q99743 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS2Q99743 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NPAS2Q99743 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.33■□□□□ 0.52
NPAS2Q99743 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
NPAS2Q99743 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
NPAS2Q99743 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS2Q99743 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPAS2Q99743 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.32■□□□□ 0.52
NPAS2Q99743 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NPAS2Q99743 FEM1AP3-201ENST00000403722 1741 ntBASIC18.32■□□□□ 0.52
NPAS2Q99743 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NPAS2Q99743 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NPAS2Q99743 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.32■□□□□ 0.52
NPAS2Q99743 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NPAS2Q99743 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPAS2Q99743 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NPAS2Q99743 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS2Q99743 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.32■□□□□ 0.52
NPAS2Q99743 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NPAS2Q99743 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.32■□□□□ 0.52
NPAS2Q99743 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPAS2Q99743 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.32■□□□□ 0.52
NPAS2Q99743 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.32■□□□□ 0.52
NPAS2Q99743 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS2Q99743 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
NPAS2Q99743 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.31■□□□□ 0.52
NPAS2Q99743 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
NPAS2Q99743 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS2Q99743 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.31■□□□□ 0.52
NPAS2Q99743 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS2Q99743 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS2Q99743 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 KRT16P5-201ENST00000455284 522 ntBASIC18.31■□□□□ 0.52
NPAS2Q99743 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.31■□□□□ 0.52
NPAS2Q99743 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
NPAS2Q99743 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.31■□□□□ 0.52
NPAS2Q99743 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
NPAS2Q99743 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.31■□□□□ 0.52
NPAS2Q99743 AC090340.1-201ENST00000620778 4980 ntBASIC18.31■□□□□ 0.52
NPAS2Q99743 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
NPAS2Q99743 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NPAS2Q99743 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NPAS2Q99743 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS2Q99743 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
NPAS2Q99743 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS2Q99743 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.3■□□□□ 0.52
NPAS2Q99743 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS2Q99743 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.3■□□□□ 0.52
NPAS2Q99743 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
NPAS2Q99743 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS2Q99743 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS2Q99743 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS2Q99743 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NPAS2Q99743 ABALON-201ENST00000629058 1903 ntBASIC18.3■□□□□ 0.52
NPAS2Q99743 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS2Q99743 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NPAS2Q99743 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPAS2Q99743 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS2Q99743 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.3■□□□□ 0.52
NPAS2Q99743 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.3■□□□□ 0.52
NPAS2Q99743 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.3■□□□□ 0.52
NPAS2Q99743 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms