Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.76■□□□□ 0.43
BBS4Q96RK4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
BBS4Q96RK4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BBS4Q96RK4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 HEIH-201ENST00000623091 1652 ntBASIC17.75■□□□□ 0.43
BBS4Q96RK4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 AC008550.1-201ENST00000511500 884 ntBASIC17.75■□□□□ 0.43
BBS4Q96RK4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 DGCR10-201ENST00000609839 495 ntBASIC17.75■□□□□ 0.43
BBS4Q96RK4 AC026471.5-201ENST00000615068 467 ntBASIC17.75■□□□□ 0.43
BBS4Q96RK4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BBS4Q96RK4 ANO7L1-203ENST00000602586 1720 ntBASIC17.75■□□□□ 0.43
BBS4Q96RK4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.75■□□□□ 0.43
BBS4Q96RK4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 AC097488.1-201ENST00000507834 756 ntBASIC17.74■□□□□ 0.43
BBS4Q96RK4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 AP006294.2-201ENST00000641667 209 ntBASIC17.74■□□□□ 0.43
BBS4Q96RK4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BBS4Q96RK4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
BBS4Q96RK4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BBS4Q96RK4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS4Q96RK4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS4Q96RK4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS4Q96RK4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 MFAP1P1-201ENST00000442257 1255 ntBASIC17.73■□□□□ 0.43
BBS4Q96RK4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS4Q96RK4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 REXO1L10P-201ENST00000615707 1290 ntBASIC17.73■□□□□ 0.43
BBS4Q96RK4 REXO1L12P-201ENST00000622156 912 ntBASIC17.73■□□□□ 0.43
BBS4Q96RK4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS4Q96RK4 KRT8P32-201ENST00000512863 1461 ntBASIC17.73■□□□□ 0.43
BBS4Q96RK4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS4Q96RK4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 WIZP1-201ENST00000531444 2299 ntBASIC17.73■□□□□ 0.43
BBS4Q96RK4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BBS4Q96RK4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BBS4Q96RK4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.72■□□□□ 0.43
BBS4Q96RK4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BBS4Q96RK4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms