Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 STARP1-201ENST00000397973 869 ntBASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 AC034232.1-201ENST00000506026 1064 ntBASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 AC006333.2-201ENST00000607957 2099 ntBASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMARCD1Q96GM5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 MYC-208ENST00000641036 567 ntBASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMARCD1Q96GM5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 ARMC10P1-201ENST00000313754 855 ntBASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 AC087388.1-201ENST00000571370 1112 ntBASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMARCD1Q96GM5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 SPDYE15P-201ENST00000424157 909 ntBASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 KRT18P38-201ENST00000449496 1282 ntBASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 AC104390.1-201ENST00000555663 520 ntBASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms