Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 AC010240.3-201ENST00000607688 395 ntBASIC18.76■□□□□ 0.59
SIPA1Q96FS4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 IRX1P1-201ENST00000438849 1838 ntBASIC18.76■□□□□ 0.59
SIPA1Q96FS4 KRT8P32-201ENST00000512863 1461 ntBASIC18.76■□□□□ 0.59
SIPA1Q96FS4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 AC093525.10-201ENST00000625130 1569 ntBASIC18.76■□□□□ 0.59
SIPA1Q96FS4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIPA1Q96FS4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SIPA1Q96FS4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 AC026396.1-201ENST00000419388 421 ntBASIC18.74■□□□□ 0.59
SIPA1Q96FS4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIPA1Q96FS4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 TSPY22P-201ENST00000427496 604 ntBASIC18.73■□□□□ 0.59
SIPA1Q96FS4 AP002383.4-201ENST00000442518 975 ntBASIC18.73■□□□□ 0.59
SIPA1Q96FS4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 MIR3180-1-201ENST00000580374 94 ntBASIC18.73■□□□□ 0.59
SIPA1Q96FS4 MIR3180-3-201ENST00000584616 94 ntBASIC18.73■□□□□ 0.59
SIPA1Q96FS4 AP002414.4-201ENST00000589764 1148 ntBASIC18.73■□□□□ 0.59
SIPA1Q96FS4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIPA1Q96FS4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.72■□□□□ 0.59
SIPA1Q96FS4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms