Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC28Q96AY4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC28Q96AY4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC28Q96AY4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TTC28Q96AY4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC28Q96AY4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 AP002414.3-201ENST00000589352 1468 ntBASIC18.96■□□□□ 0.63
TTC28Q96AY4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 RCN1P2-201ENST00000398357 915 ntBASIC18.96■□□□□ 0.63
TTC28Q96AY4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC28Q96AY4 AC107918.4-202ENST00000641623 219 ntBASIC18.96■□□□□ 0.63
TTC28Q96AY4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC28Q96AY4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 AC093214.1-201ENST00000511688 1107 ntBASIC18.95■□□□□ 0.62
TTC28Q96AY4 AL513210.1-201ENST00000629608 234 ntBASIC18.95■□□□□ 0.62
TTC28Q96AY4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 KRT89P-201ENST00000620027 1478 ntBASIC18.95■□□□□ 0.62
TTC28Q96AY4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 ABCD1P5-201ENST00000445663 754 ntBASIC18.95■□□□□ 0.62
TTC28Q96AY4 AC108751.1-201ENST00000490852 363 ntBASIC18.95■□□□□ 0.62
TTC28Q96AY4 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.95■□□□□ 0.62
TTC28Q96AY4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TTC28Q96AY4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC28Q96AY4 LAGE3P1-201ENST00000425356 484 ntBASIC18.94■□□□□ 0.62
TTC28Q96AY4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC28Q96AY4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC28Q96AY4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC28Q96AY4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TTC28Q96AY4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TTC28Q96AY4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.94■□□□□ 0.62
TTC28Q96AY4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TTC28Q96AY4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC28Q96AY4 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.93■□□□□ 0.62
TTC28Q96AY4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC28Q96AY4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TTC28Q96AY4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TTC28Q96AY4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.93■□□□□ 0.62
TTC28Q96AY4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC28Q96AY4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC28Q96AY4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC28Q96AY4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.93■□□□□ 0.62
TTC28Q96AY4 CR383656.12-201ENST00000549567 513 ntBASIC18.93■□□□□ 0.62
TTC28Q96AY4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.93■□□□□ 0.62
TTC28Q96AY4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC28Q96AY4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC28Q96AY4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TTC28Q96AY4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TTC28Q96AY4 MIR661-201ENST00000384842 89 ntBASIC18.93■□□□□ 0.62
TTC28Q96AY4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TTC28Q96AY4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.93■□□□□ 0.62
TTC28Q96AY4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.93■□□□□ 0.62
TTC28Q96AY4 KRT8P7-201ENST00000533003 1432 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms