Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLNQ969V3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.17■□□□□ 0.5
NCLNQ969V3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.17■□□□□ 0.5
NCLNQ969V3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NCLNQ969V3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.17■□□□□ 0.5
NCLNQ969V3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLNQ969V3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.17■□□□□ 0.5
NCLNQ969V3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.17■□□□□ 0.5
NCLNQ969V3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.17■□□□□ 0.5
NCLNQ969V3 MIR4497-201ENST00000583208 89 ntBASIC18.17■□□□□ 0.5
NCLNQ969V3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCLNQ969V3 AC073195.1-201ENST00000607241 877 ntBASIC18.17■□□□□ 0.5
NCLNQ969V3 AL353708.3-201ENST00000610272 989 ntBASIC18.17■□□□□ 0.5
NCLNQ969V3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLNQ969V3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLNQ969V3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
NCLNQ969V3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLNQ969V3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLNQ969V3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NCLNQ969V3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NCLNQ969V3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCLNQ969V3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NCLNQ969V3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.17■□□□□ 0.5
NCLNQ969V3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.17■□□□□ 0.5
NCLNQ969V3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCLNQ969V3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NCLNQ969V3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.16■□□□□ 0.5
NCLNQ969V3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLNQ969V3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLNQ969V3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.16■□□□□ 0.5
NCLNQ969V3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NCLNQ969V3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 AC018470.1-201ENST00000624790 3129 ntBASIC18.16■□□□□ 0.5
NCLNQ969V3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.16■□□□□ 0.5
NCLNQ969V3 TSPY7P-201ENST00000431358 1114 ntBASIC18.16■□□□□ 0.5
NCLNQ969V3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.16■□□□□ 0.5
NCLNQ969V3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLNQ969V3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLNQ969V3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.16■□□□□ 0.5
NCLNQ969V3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.16■□□□□ 0.5
NCLNQ969V3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLNQ969V3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.16■□□□□ 0.5
NCLNQ969V3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
NCLNQ969V3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCLNQ969V3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.16■□□□□ 0.5
NCLNQ969V3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.15■□□□□ 0.5
NCLNQ969V3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NCLNQ969V3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.15■□□□□ 0.5
NCLNQ969V3 WIZP1-201ENST00000531444 2299 ntBASIC18.15■□□□□ 0.5
NCLNQ969V3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NCLNQ969V3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.15■□□□□ 0.5
NCLNQ969V3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
NCLNQ969V3 NIFKP9-201ENST00000419265 221 ntBASIC18.15■□□□□ 0.5
NCLNQ969V3 FAM197Y1-201ENST00000421178 764 ntBASIC18.15■□□□□ 0.5
NCLNQ969V3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NCLNQ969V3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.15■□□□□ 0.5
NCLNQ969V3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.15■□□□□ 0.5
NCLNQ969V3 CD177P1-201ENST00000606252 935 ntBASIC18.15■□□□□ 0.5
NCLNQ969V3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.15■□□□□ 0.5
NCLNQ969V3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NCLNQ969V3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.15■□□□□ 0.5
NCLNQ969V3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCLNQ969V3 KRT8P8-201ENST00000434750 1448 ntBASIC18.15■□□□□ 0.5
NCLNQ969V3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NCLNQ969V3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NCLNQ969V3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCLNQ969V3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLNQ969V3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCLNQ969V3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCLNQ969V3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
NCLNQ969V3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.14■□□□□ 0.49
NCLNQ969V3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms