Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDH19Q8TAB3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDH19Q8TAB3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH19Q8TAB3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PCDH19Q8TAB3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH19Q8TAB3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH19Q8TAB3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH19Q8TAB3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH19Q8TAB3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH19Q8TAB3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH19Q8TAB3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 AL390955.1-201ENST00000428694 934 ntBASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 FITM1-202ENST00000559294 800 ntBASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH19Q8TAB3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 AC073592.3-201ENST00000625118 1834 ntBASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 FAM210CP-201ENST00000445714 574 ntBASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 MIR4674-201ENST00000582457 87 ntBASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 AL023803.3-201ENST00000615559 522 ntBASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH19Q8TAB3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PCDH19Q8TAB3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms