Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC009113.1-201ENST00000570267 2443 ntBASIC17.53■□□□□ 0.4
NUP43Q8NFH3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NUP43Q8NFH3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.53■□□□□ 0.4
NUP43Q8NFH3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUP43Q8NFH3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUP43Q8NFH3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUP43Q8NFH3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.53■□□□□ 0.4
NUP43Q8NFH3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NUP43Q8NFH3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 AC008622.2-201ENST00000617006 1229 ntBASIC17.52■□□□□ 0.4
NUP43Q8NFH3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.52■□□□□ 0.4
NUP43Q8NFH3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUP43Q8NFH3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
NUP43Q8NFH3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUP43Q8NFH3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUP43Q8NFH3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUP43Q8NFH3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUP43Q8NFH3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.39
NUP43Q8NFH3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NUP43Q8NFH3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NUP43Q8NFH3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 AL357033.4-201ENST00000617703 1807 ntBASIC17.51■□□□□ 0.39
NUP43Q8NFH3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 MIR4785-201ENST00000585005 73 ntBASIC17.51■□□□□ 0.39
NUP43Q8NFH3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 NEFHP1-201ENST00000412845 2629 ntBASIC17.51■□□□□ 0.39
NUP43Q8NFH3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NUP43Q8NFH3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NUP43Q8NFH3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms